Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative outer membrane starch-binding protein | BCL90_2781 | Not Available | Negative | 3116355 - 3118229 | 70382.7 |
| tonb-linked susc/raga family outer membrane protein | BCL90_2782 | Not Available | Negative | 3118265 - 3121537 | 120678.0 |
| atp-dependent dna helicase recg | BCL90_2783 | Not Available | Negative | 3122000 - 3124105 | 79825.5 |
| 2-iminobutanoate/2-iminopropanoate deaminase | BCL90_2785 | Not Available | Negative | 3124411 - 3124791 | 13669.4 |
| hypothetical protein | BCL90_2786 | Not Available | Negative | 3124802 - 3124939 | 5419.94 |
| oop family ompa-ompf porin | BCL90_2787 | Not Available | Negative | 3125037 - 3126380 | 47566.7 |
| xaa-pro aminopeptidase | BCL90_2788 | Not Available | Positive | 3126552 - 3127841 | 49333.5 |
| lao/ao transport system kinase | BCL90_2789 | Not Available | Negative | 3127935 - 3128831 | 32601.6 |
| hypothetical protein | BCL90_2790 | Not Available | Positive | 3128889 - 3129764 | 34464.3 |
| glycosyltransferase involved in cell wall biosynthesis | BCL90_2791 | Not Available | Positive | 3129812 - 3130879 | 41051.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
