Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase-like protein | BCL90_2745 | Not Available | Positive | 3081664 - 3084555 | 111557.0 |
| protein of unknown function (duf2892) | BCL90_2746 | Not Available | Positive | 3084816 - 3085133 | 11574.7 |
| uncharacterized protein duf1080 | BCL90_2747 | Not Available | Positive | 3085199 - 3085981 | 28755.9 |
| putative membrane protein | BCL90_2748 | Not Available | Positive | 3086091 - 3086693 | 22578.1 |
| leucyl/phenylalanyl-trna--protein transferase | BCL90_2750 | Not Available | Negative | 3086881 - 3087537 | 24887.1 |
| uncharacterized protein (duf1800 family) | BCL90_2751 | Not Available | Positive | 3087587 - 3089029 | 54809.5 |
| uncharacterized protein (duf1501 family) | BCL90_2752 | Not Available | Positive | 3089059 - 3090321 | 47362.2 |
| hypothetical protein | BCL90_2753 | Not Available | Negative | 3090382 - 3090744 | 13672.5 |
| uncharacterized membrane protein yccf (duf307 family) | BCL90_2754 | Not Available | Positive | 3090839 - 3091207 | 13418.2 |
| hypothetical protein | BCL90_2755 | Not Available | Positive | 3091207 - 3091404 | 7506.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
