Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase / fumarate reductase cytochrome b subunit | BCL90_2735 | Not Available | Negative | 3067829 - 3068509 | 25031.1 |
| putative cold-shock dna-binding protein | BCL90_2736 | Not Available | Negative | 3069222 - 3069413 | 6904.04 |
| hypothetical protein | BCL90_2737 | Not Available | Negative | 3069737 - 3070240 | 19568.5 |
| uncharacterized protein duf326 | BCL90_2738 | Not Available | Positive | 3070627 - 3071100 | 17867.5 |
| s1-c subfamily serine protease | BCL90_2739 | Not Available | Negative | 3071158 - 3072705 | 53836.9 |
| diaminopimelate epimerase | BCL90_2740 | Not Available | Positive | 3073099 - 3073881 | 29138.5 |
| hypothetical protein | BCL90_2741 | Not Available | Negative | 3073893 - 3074267 | 14940.4 |
| membrane fusion protein (multidrug efflux system) | BCL90_2742 | Not Available | Positive | 3074696 - 3075835 | 40463.4 |
| hae1 family hydrophobic/amphiphilic exporter-1 | BCL90_2743 | Not Available | Positive | 3075884 - 3079066 | 114799.0 |
| nodt family efflux transporter outer membrane factor (omf) lipoprotein | BCL90_2744 | Not Available | Positive | 3079077 - 3080477 | 51279.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
