Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_2725 | Not Available | Positive | 3058435 - 3058824 | 14017.5 |
| hypothetical protein | BCL90_2726 | Not Available | Positive | 3058828 - 3059475 | 25470.7 |
| histidine kinase/dna gyrase b/hsp90-like atpase | BCL90_2727 | Not Available | Positive | 3059442 - 3060233 | 29717.2 |
| luxr family two component transcriptional regulator | BCL90_2728 | Not Available | Positive | 3060236 - 3060877 | 23803.2 |
| putative transcriptional regulator | BCL90_2729 | Not Available | Positive | 3061090 - 3061467 | 14690.9 |
| outer membrane transport energization protein tonb | BCL90_2730 | Not Available | Positive | 3061464 - 3063455 | 74423.6 |
| tonb-dependent susc/raga subfamily outer membrane receptor | BCL90_2731 | Not Available | Positive | 3063468 - 3064100 | 22842.6 |
| protein tonb | BCL90_2732 | Not Available | Positive | 3064127 - 3064525 | 14933.2 |
| succinate dehydrogenase / fumarate reductase iron-sulfur subunit | BCL90_2733 | Not Available | Negative | 3064976 - 3065746 | 27845.4 |
| succinate dehydrogenase subunit a | BCL90_2734 | Not Available | Negative | 3065832 - 3067811 | 73176.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
