Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor protein involved in fe transport | BCL90_2714 | Not Available | Positive | 3048133 - 3050619 | 91721.7 |
| nudix domain-containing protein | BCL90_2715 | Not Available | Positive | 3050729 - 3051283 | 20816.9 |
| hypothetical protein | BCL90_2716 | Not Available | Positive | 3052115 - 3052255 | 5389.31 |
| rep element-mobilizing transposase rayt | BCL90_2717 | Not Available | Positive | 3052206 - 3052667 | 18649.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | BCL90_2718 | Not Available | Positive | 3052704 - 3053462 | 28676.6 |
| lyttr family two component transcriptional regulator | BCL90_2719 | Not Available | Negative | 3053707 - 3054456 | 28512.8 |
| histidine kinase | BCL90_2720 | Not Available | Negative | 3054510 - 3055541 | 39796.0 |
| hypothetical protein | BCL90_2721 | Not Available | Positive | 3055802 - 3056059 | 9263.58 |
| abc-2 type transport system atp-binding protein | BCL90_2722 | Not Available | Positive | 3056065 - 3056973 | 33060.5 |
| hypothetical protein | BCL90_2723 | Not Available | Positive | 3056975 - 3057772 | 30171.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
