Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,4-dienoyl-coa reductase-like nadh-dependent reductase (old yellow enzyme family) | BCL90_2702 | Not Available | Positive | 3037397 - 3038497 | 40197.4 |
| hypothetical protein | BCL90_2705 | Not Available | Positive | 3039059 - 3039949 | 33506.3 |
| hypothetical protein | BCL90_2706 | Not Available | Negative | 3039946 - 3041136 | 43968.5 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_2707 | Not Available | Negative | 3041133 - 3041771 | 24374.2 |
| secreted repeat protein with y-x4-d motif | BCL90_2708 | Not Available | Positive | 3041947 - 3042813 | 31093.7 |
| histidine triad (hit) family protein | BCL90_2709 | Not Available | Negative | 3042872 - 3043270 | 14530.0 |
| transcription elongation factor grea | BCL90_2710 | Not Available | Negative | 3043359 - 3043832 | 17184.7 |
| hypothetical protein | BCL90_2711 | Not Available | Positive | 3044133 - 3046013 | 70931.1 |
| organic hydroperoxide reductase osmc/ohra | BCL90_2712 | Not Available | Negative | 3046176 - 3046652 | 17562.7 |
| d-3-phosphoglycerate dehydrogenase | BCL90_2713 | Not Available | Negative | 3046985 - 3047941 | 35821.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
