Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-like dna-binding protein | BCL90_2692 | Not Available | Positive | 3029512 - 3030402 | 34386.1 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | BCL90_2693 | Not Available | Positive | 3030470 - 3031204 | 26157.1 |
| fr47-like protein | BCL90_2694 | Not Available | Positive | 3031792 - 3032478 | 26081.4 |
| iron-binding cdgsh zinc finger protein | BCL90_2695 | Not Available | Positive | 3032563 - 3032787 | 8159.74 |
| arac-like dna-binding protein | BCL90_2696 | Not Available | Negative | 3032855 - 3033658 | 30706.5 |
| short-subunit dehydrogenase | BCL90_2697 | Not Available | Negative | 3033864 - 3034742 | 31673.8 |
| doxx-like protein | BCL90_2698 | Not Available | Negative | 3034894 - 3035268 | 14025.4 |
| hxlr family transcriptional regulator | BCL90_2699 | Not Available | Positive | 3035368 - 3035766 | 15172.4 |
| hypothetical protein | BCL90_2700 | Not Available | Positive | 3035862 - 3036395 | 19802.4 |
| arsr family transcriptional regulator | BCL90_2701 | Not Available | Positive | 3037083 - 3037385 | 11459.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
