Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_2642 | Not Available | Negative | 2990067 - 2990369 | 11542.1 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | BCL90_2643 | Not Available | Negative | 2990541 - 2991494 | 35878.3 |
| methionine synthase (b12-dependent) | BCL90_2644 | Not Available | Negative | 2991654 - 2995370 | 137726.0 |
| hypothetical protein | BCL90_2645 | Not Available | Negative | 2995754 - 2996509 | 27532.4 |
| hypothetical protein | BCL90_2646 | Not Available | Negative | 2996548 - 2997114 | 22931.7 |
| n-acetylmuramic acid 6-phosphate etherase | BCL90_2647 | Not Available | Negative | 2997227 - 2998030 | 28671.4 |
| carboxyl-terminal processing protease | BCL90_2648 | Not Available | Positive | 2998220 - 2999827 | 58921.2 |
| l-histidine carboxy-lyase (histamine-forming) | BCL90_2649 | Not Available | Positive | 2999981 - 3001111 | 42066.3 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | BCL90_2650 | Not Available | Positive | 3001186 - 3001782 | 20980.5 |
| rimj/riml family protein n-acetyltransferase | BCL90_2651 | Not Available | Positive | 3001894 - 3002400 | 19477.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
