Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione synthase/rimk-type ligase-like atp-grasp enzyme | BCL90_2590 | Not Available | Positive | 2939189 - 2940262 | 40059.7 |
| carboxylate-amine ligase | BCL90_2591 | Not Available | Positive | 2940291 - 2941391 | 42173.4 |
| gmp synthase-like glutamine amidotransferase | BCL90_2592 | Not Available | Positive | 2941399 - 2942253 | 32530.8 |
| hypothetical protein | BCL90_2593 | Not Available | Positive | 2942437 - 2943624 | 45712.1 |
| hypothetical protein | BCL90_2594 | Not Available | Positive | 2943692 - 2944243 | 20998.5 |
| crp-like camp-binding protein | BCL90_2595 | Not Available | Positive | 2944482 - 2945069 | 22908.9 |
| polyisoprenoid-binding protein ycei | BCL90_2596 | Not Available | Positive | 2945305 - 2945835 | 19157.5 |
| hypothetical protein | BCL90_2597 | Not Available | Positive | 2945903 - 2946772 | 32192.2 |
| cellulose synthase/poly-beta-1,6-n-acetylglucosamine synthase-like glycosyltransferase | BCL90_2599 | Not Available | Positive | 2947578 - 2950979 | 128837.0 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | BCL90_2600 | Not Available | Negative | 2951131 - 2951607 | 17244.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
