Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin iii | BCL90_2568 | Not Available | Negative | 2916263 - 2916937 | 25978.2 |
| alpha-l-fucosidase | BCL90_2569 | Not Available | Positive | 2917102 - 2918553 | 53967.9 |
| rhomboid protease glup | BCL90_2570 | Not Available | Negative | 2918556 - 2920076 | 58080.7 |
| methyltransferase family protein | BCL90_2571 | Not Available | Negative | 2920084 - 2920833 | 28575.6 |
| tricorn protease-like protein | BCL90_2572 | Not Available | Negative | 2921028 - 2924225 | 120748.0 |
| glycosyltransferase involved in cell wall biosynthesis | BCL90_2573 | Not Available | Positive | 2924398 - 2925678 | 48103.9 |
| putative nuclease of restriction endonuclease-like (recb) superfamily | BCL90_2574 | Not Available | Positive | 2925801 - 2926892 | 42200.8 |
| glycosyltransferase involved in cell wall biosynthesis | BCL90_2575 | Not Available | Positive | 2926896 - 2927642 | 28809.4 |
| hypothetical protein | BCL90_2576 | Not Available | Positive | 2927646 - 2928335 | 27199.8 |
| protease i | BCL90_2577 | Not Available | Positive | 2928410 - 2928970 | 20200.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
