Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_2557 | Not Available | Negative | 2908429 - 2908728 | 11063.5 |
| smr domain-containing protein | BCL90_2558 | Not Available | Negative | 2908942 - 2909895 | 35912.0 |
| ribosome biogenesis gtpase | BCL90_2559 | Not Available | Negative | 2910099 - 2911019 | 34261.1 |
| fumarase class ii | BCL90_2560 | Not Available | Positive | 2911207 - 2912604 | 49810.9 |
| hypothetical protein | BCL90_2562 | Not Available | Positive | 2913085 - 2913600 | 19751.8 |
| s1/p1 nuclease | BCL90_2563 | Not Available | Positive | 2913603 - 2914409 | 30603.8 |
| hypothetical protein | BCL90_2564 | Not Available | Positive | 2914528 - 2914680 | 5566.13 |
| hypothetical protein | BCL90_2565 | Not Available | Positive | 2914686 - 2914949 | 9395.09 |
| protein tyrosine phosphatase | BCL90_2566 | Not Available | Positive | 2914964 - 2915386 | 16032.2 |
| type 1 glutamine amidotransferase | BCL90_2567 | Not Available | Positive | 2915428 - 2916195 | 29248.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
