Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine cyclotransferase | BCL90_2547 | Not Available | Negative | 2894812 - 2895894 | 39968.6 |
| putative endonuclease | BCL90_2548 | Not Available | Negative | 2895872 - 2896237 | 14072.7 |
| dna primase | BCL90_2549 | Not Available | Negative | 2896452 - 2898431 | 74452.9 |
| lysophospholipase l1-like esterase | BCL90_2550 | Not Available | Negative | 2898578 - 2899237 | 24438.8 |
| cubico group peptidase (beta-lactamase class c family) | BCL90_2551 | Not Available | Negative | 2899256 - 2900824 | 57712.2 |
| hypothetical protein | BCL90_2552 | Not Available | Negative | 2900884 - 2901921 | 40972.6 |
| amidohydrolase | BCL90_2553 | Not Available | Negative | 2901945 - 2903129 | 43436.9 |
| sporulation related protein | BCL90_2554 | Not Available | Negative | 2903116 - 2903577 | 17780.7 |
| pega domain-containing protein | BCL90_2555 | Not Available | Negative | 2904209 - 2904586 | 13466.5 |
| preprotein translocase subunit seca | BCL90_2556 | Not Available | Negative | 2904812 - 2908288 | 130462.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
