Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omptin family protein | BCL90_2537 | Not Available | Positive | 2886217 - 2887134 | 34244.5 |
| 2-phosphosulfolactate phosphatase | BCL90_2538 | Not Available | Negative | 2887278 - 2887997 | 26577.7 |
| putative nuclease of restriction endonuclease-like (recb) superfamily | BCL90_2539 | Not Available | Negative | 2888008 - 2889042 | 40029.4 |
| aminomethyltransferase | BCL90_2540 | Not Available | Negative | 2889078 - 2890157 | 39404.0 |
| glycosyltransferase involved in cell wall biosynthesis | BCL90_2541 | Not Available | Negative | 2890416 - 2891618 | 46468.1 |
| rnase hii | BCL90_2542 | Not Available | Negative | 2891641 - 2892249 | 22636.1 |
| hypothetical protein | BCL90_2543 | Not Available | Positive | 2892319 - 2893020 | 27410.6 |
| tfox-like protein | BCL90_2544 | Not Available | Positive | 2893032 - 2893370 | 12816.7 |
| hypothetical protein | BCL90_2545 | Not Available | Positive | 2893462 - 2894094 | 22650.1 |
| uncharacterized protein duf4251 | BCL90_2546 | Not Available | Positive | 2894192 - 2894722 | 19540.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
