Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apolipoprotein n-acyltransferase | BCL90_2527 | Not Available | Positive | 2876467 - 2878095 | 61075.1 |
| putative damage-inducible protein dinb | BCL90_2528 | Not Available | Positive | 2878088 - 2878549 | 17881.5 |
| signal peptidase ii | BCL90_2529 | Not Available | Positive | 2878555 - 2879061 | 19186.9 |
| dual-action heigh metallo-peptidase | BCL90_2530 | Not Available | Positive | 2879203 - 2879952 | 27036.2 |
| osmotically inducible protein osmc | BCL90_2531 | Not Available | Positive | 2880141 - 2880557 | 14796.3 |
| nad+ synthase (glutamine-hydrolysing) | BCL90_2532 | Not Available | Negative | 2880731 - 2882371 | 61184.0 |
| outer membrane protein with beta-barrel domain | BCL90_2533 | Not Available | Negative | 2882416 - 2883090 | 24324.1 |
| gliding motility-associated lipoprotein gldb | BCL90_2534 | Not Available | Positive | 2883121 - 2884155 | 40356.3 |
| nte family protein | BCL90_2535 | Not Available | Positive | 2884266 - 2885036 | 27745.3 |
| astacin (peptidase family m12a) | BCL90_2536 | Not Available | Positive | 2885352 - 2886146 | 29305.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
