Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hae1 family hydrophobic/amphiphilic exporter-1 | BCL90_2497 | Not Available | Positive | 2840538 - 2843732 | 116387.0 |
| hypothetical protein | BCL90_2498 | Not Available | Positive | 2843999 - 2844829 | 31115.2 |
| fucose permease | BCL90_2499 | Not Available | Negative | 2845273 - 2846478 | 43545.4 |
| thiaminase /4-amino-5-aminomethyl-2-methylpyrimidine deaminase | BCL90_2500 | Not Available | Negative | 2846590 - 2847243 | 24939.8 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | BCL90_2501 | Not Available | Negative | 2847240 - 2848073 | 29065.6 |
| trypsin | BCL90_2502 | Not Available | Negative | 2848496 - 2849890 | 49903.7 |
| hypothetical protein | BCL90_2503 | Not Available | Negative | 2850070 - 2851611 | 55129.0 |
| dihydrolipoamide dehydrogenase | BCL90_2504 | Not Available | Negative | 2851986 - 2853392 | 49815.2 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | BCL90_2505 | Not Available | Negative | 2853646 - 2854002 | 13985.7 |
| crp-like camp-binding protein | BCL90_2506 | Not Available | Negative | 2854065 - 2854616 | 20947.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
