Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | BCL90_2487 | Not Available | Negative | 2829023 - 2830306 | 49118.1 |
| bacteriocin-processing peptidase | BCL90_2488 | Not Available | Negative | 2830316 - 2832502 | 82983.6 |
| thiol-disulfide isomerase/thioredoxin | BCL90_2489 | Not Available | Negative | 2832509 - 2833996 | 57345.9 |
| hypothetical protein | BCL90_2490 | Not Available | Negative | 2834058 - 2834276 | 7749.0 |
| hypothetical protein | BCL90_2491 | Not Available | Negative | 2834661 - 2834765 | 3454.29 |
| peptidase c39-like protein | BCL90_2492 | Not Available | Negative | 2834936 - 2836522 | 60030.4 |
| beta-carotene 3-hydroxylase | BCL90_2493 | Not Available | Negative | 2836757 - 2837197 | 17506.8 |
| tetr family transcriptional regulator | BCL90_2494 | Not Available | Positive | 2837364 - 2837975 | 23584.9 |
| outer membrane protein tolc | BCL90_2495 | Not Available | Positive | 2838063 - 2839403 | 49757.6 |
| rnd family efflux transporter mfp subunit | BCL90_2496 | Not Available | Positive | 2839406 - 2840473 | 38485.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
