Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar/nucleoside kinase (ribokinase family) | BCL90_2477 | Not Available | Positive | 2820110 - 2821030 | 33888.9 |
| putative heme/steroid binding protein | BCL90_2478 | Not Available | Negative | 2821144 - 2821386 | 9243.96 |
| lycopene cyclase domain-containing protein | BCL90_2479 | Not Available | Negative | 2821858 - 2822547 | 26991.8 |
| hypothetical protein | BCL90_2480 | Not Available | Negative | 2822549 - 2823079 | 20243.0 |
| putative endonuclease | BCL90_2481 | Not Available | Positive | 2823428 - 2823730 | 12271.5 |
| phytoene desaturase | BCL90_2482 | Not Available | Positive | 2824082 - 2825563 | 56331.5 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_2483 | Not Available | Negative | 2826017 - 2826547 | 20428.5 |
| udp-n-acetylmuramate dehydrogenase | BCL90_2484 | Not Available | Negative | 2826668 - 2827684 | 37015.2 |
| hypothetical protein | BCL90_2485 | Not Available | Negative | 2827726 - 2827950 | 8186.83 |
| hypothetical protein | BCL90_2486 | Not Available | Negative | 2828252 - 2828923 | 24955.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
