Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_2467 | Not Available | Negative | 2806299 - 2807294 | 39168.7 |
| type iv secretory system conjugative dna transfer vird4/trag family protein | BCL90_2468 | Not Available | Negative | 2807411 - 2809462 | 77337.5 |
| relaxase/mobilization nuclease-like protein | BCL90_2469 | Not Available | Negative | 2809473 - 2810732 | 47334.0 |
| hypothetical protein | BCL90_2470 | Not Available | Negative | 2810717 - 2811124 | 15879.5 |
| hypothetical protein | BCL90_2471 | Not Available | Negative | 2811321 - 2811500 | 7109.73 |
| type i restriction enzyme r subunit | BCL90_2472 | Not Available | Negative | 2811831 - 2814797 | 113135.0 |
| type i restriction enzyme s subunit/type i restriction enzyme m protein | BCL90_2473 | Not Available | Negative | 2814801 - 2815451 | 24984.3 |
| type i restriction enzyme m protein | BCL90_2474 | Not Available | Negative | 2815448 - 2817478 | 78026.0 |
| hypothetical protein | BCL90_2475 | Not Available | Positive | 2818208 - 2818369 | 6228.64 |
| Trna-asn | Not Available | Not Available | Positive | 2819888 - 2819964 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
