Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | BCL90_2456 | Not Available | Negative | 2796495 - 2799677 | 118680.0 |
| helix-turn-helix protein | BCL90_2457 | Not Available | Positive | 2800550 - 2801095 | 21143.5 |
| hypothetical protein | BCL90_2459 | Not Available | Negative | 2801931 - 2802611 | 27023.6 |
| hepn domain-containing protein | BCL90_2460 | Not Available | Negative | 2802633 - 2803541 | 34367.6 |
| hypothetical protein | BCL90_2461 | Not Available | Negative | 2803543 - 2804076 | 21101.5 |
| hypothetical protein | BCL90_2462 | Not Available | Negative | 2804021 - 2804425 | 15742.1 |
| hypothetical protein | BCL90_2463 | Not Available | Negative | 2804409 - 2804714 | 11772.3 |
| helix-turn-helix protein | BCL90_2464 | Not Available | Positive | 2804972 - 2805361 | 14832.5 |
| hypothetical protein | BCL90_2465 | Not Available | Positive | 2805608 - 2805847 | 8775.64 |
| hypothetical protein | BCL90_2466 | Not Available | Positive | 2806016 - 2806180 | 6142.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
