Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_2416 | Not Available | Negative | 2760342 - 2761451 | 44034.0 |
| hnh endonuclease | BCL90_2417 | Not Available | Negative | 2761594 - 2762835 | 47965.6 |
| hypothetical protein | BCL90_2418 | Not Available | Negative | 2762850 - 2763980 | 43123.4 |
| hypothetical protein | BCL90_2419 | Not Available | Negative | 2764501 - 2764860 | 13374.4 |
| hypothetical protein | BCL90_2420 | Not Available | Negative | 2764983 - 2765453 | 17290.4 |
| bifunctional non-homologous end joining protein ligd | BCL90_2421 | Not Available | Positive | 2765539 - 2766531 | 37988.9 |
| uncharacterized protein duf3606 | BCL90_2422 | Not Available | Negative | 2766635 - 2766823 | 6877.21 |
| dna polymerase-3 subunit alpha | BCL90_2423 | Not Available | Negative | 2766883 - 2769825 | 112330.0 |
| dna polymerase-4 | BCL90_2424 | Not Available | Negative | 2769831 - 2770988 | 43251.9 |
| hypothetical protein | BCL90_2425 | Not Available | Negative | 2771256 - 2771627 | 14579.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
