Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-like protein | BCL90_2396 | Not Available | Negative | 2740346 - 2740861 | 19106.5 |
| oxalate decarboxylase | BCL90_2397 | Not Available | Negative | 2740877 - 2741605 | 26261.5 |
| cytosol aminopeptidase family protein | BCL90_2398 | Not Available | Negative | 2741630 - 2742352 | 25509.2 |
| hypothetical protein | BCL90_2399 | Not Available | Negative | 2742605 - 2743156 | 21594.7 |
| 2,4-dienoyl-coa reductase-like nadh-dependent reductase (old yellow enzyme family) | BCL90_2400 | Not Available | Negative | 2743177 - 2744238 | 38848.5 |
| signal transduction histidine kinase | BCL90_2401 | Not Available | Negative | 2744251 - 2746458 | 82330.7 |
| lyttr family two component transcriptional regulator | BCL90_2402 | Not Available | Negative | 2746534 - 2747229 | 26510.3 |
| starvation-inducible dna-binding protein | BCL90_2403 | Not Available | Negative | 2747293 - 2747766 | 18326.7 |
| hypothetical protein | BCL90_2404 | Not Available | Positive | 2748635 - 2748826 | 7269.81 |
| hypothetical protein | BCL90_2405 | Not Available | Positive | 2749165 - 2749641 | 17167.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
