Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f0 subcomplex a subunit | BCL90_2354 | Not Available | Negative | 2694504 - 2695637 | 41850.8 |
| hypothetical protein | BCL90_2355 | Not Available | Negative | 2695652 - 2696041 | 14649.9 |
| putative f0f1-atpase subunit (ca2+/mg2+ transporter) | BCL90_2356 | Not Available | Negative | 2696250 - 2696468 | 7917.73 |
| hypothetical protein | BCL90_2357 | Not Available | Positive | 2696565 - 2699327 | 105231.0 |
| hypothetical protein | BCL90_2358 | Not Available | Positive | 2699337 - 2700065 | 28083.5 |
| penicillin-binding protein 1a | BCL90_2359 | Not Available | Positive | 2700110 - 2702329 | 82890.5 |
| hypothetical protein | BCL90_2360 | Not Available | Negative | 2702318 - 2702482 | 6003.34 |
| excinuclease abc subunit c | BCL90_2362 | Not Available | Positive | 2702525 - 2704327 | 69277.7 |
| gliding motility associated protein gldn | BCL90_2363 | Not Available | Negative | 2704568 - 2705479 | 34464.4 |
| gliding motility-associated protein gldm | BCL90_2364 | Not Available | Negative | 2705487 - 2707019 | 54897.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
