Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate isomerase | BCL90_2332 | Not Available | Positive | 2673948 - 2675594 | 61610.9 |
| putative zn-dependent peptidase | BCL90_2333 | Not Available | Positive | 2675762 - 2677075 | 49565.2 |
| putative zn-dependent peptidase | BCL90_2334 | Not Available | Positive | 2677108 - 2679186 | 74327.5 |
| hypothetical protein | BCL90_2335 | Not Available | Positive | 2679481 - 2679843 | 12783.5 |
| ycei-like domain-containing protein | BCL90_2336 | Not Available | Positive | 2679901 - 2680443 | 20154.5 |
| hypothetical protein | BCL90_2337 | Not Available | Positive | 2680449 - 2681396 | 35318.2 |
| peptide/nickel transport system permease protein | BCL90_2338 | Not Available | Negative | 2681525 - 2682667 | 41942.1 |
| cellulose synthase/poly-beta-1,6-n-acetylglucosamine synthase-like glycosyltransferase | BCL90_2339 | Not Available | Negative | 2682667 - 2683803 | 42965.5 |
| hypothetical protein | BCL90_2340 | Not Available | Negative | 2683781 - 2684758 | 37692.6 |
| holliday junction endonuclease ruvc | BCL90_2341 | Not Available | Positive | 2684800 - 2685387 | 21388.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
