Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | BCL90_2322 | Not Available | Negative | 2663590 - 2664258 | 25152.1 |
| putative o-methyltransferase yrrm | BCL90_2323 | Not Available | Negative | 2664263 - 2665045 | 29974.0 |
| regulator of sirc expression with transglutaminase-like and tpr domain | BCL90_2324 | Not Available | Positive | 2665090 - 2665959 | 33444.7 |
| chitinase | BCL90_2325 | Not Available | Positive | 2666012 - 2667103 | 40698.6 |
| cysteine-rich secretory protein family protein | BCL90_2326 | Not Available | Negative | 2667070 - 2667552 | 17529.0 |
| hypothetical protein | BCL90_2327 | Not Available | Negative | 2667619 - 2668446 | 30663.7 |
| acetyl esterase/lipase | BCL90_2328 | Not Available | Negative | 2668851 - 2669729 | 32118.6 |
| peptide chain release factor 2 | BCL90_2329 | Not Available | Negative | 2669775 - 2670849 | 40888.1 |
| carboxypeptidase ss1 | BCL90_2330 | Not Available | Negative | 2671002 - 2672306 | 46649.7 |
| hypothetical protein | BCL90_2331 | Not Available | Negative | 2672427 - 2673620 | 44539.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
