Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit 1 | BCL90_2310 | Not Available | Negative | 2648603 - 2650483 | 70418.8 |
| cytochrome c oxidase subunit 2 | BCL90_2311 | Not Available | Negative | 2650507 - 2651739 | 45914.0 |
| quinol:cytochrome c oxidoreductase quinone-binding subunit 2 | BCL90_2312 | Not Available | Negative | 2651809 - 2653062 | 47384.4 |
| quinol:cytochrome c oxidoreductase monoheme cytochrome subunit | BCL90_2313 | Not Available | Negative | 2653077 - 2653682 | 21987.1 |
| quinol:cytochrome c oxidoreductase membrane protein | BCL90_2314 | Not Available | Negative | 2653654 - 2654190 | 20026.4 |
| quinol:cytochrome c oxidoreductase quinone-binding subunit 1 | BCL90_2315 | Not Available | Negative | 2654193 - 2655665 | 55819.3 |
| quinol:cytochrome c oxidoreductase iron-sulfur protein precursor | BCL90_2316 | Not Available | Negative | 2655692 - 2658730 | 111198.0 |
| quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit | BCL90_2317 | Not Available | Negative | 2658779 - 2660074 | 47736.1 |
| homospermidine synthase (spermidine-specific) | BCL90_2318 | Not Available | Negative | 2660330 - 2661310 | 36894.2 |
| surface antigen-like protein | BCL90_2320 | Not Available | Positive | 2661775 - 2662977 | 45306.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
