Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | BCL90_2300 | Not Available | Negative | 2637572 - 2641243 | 136545.0 |
| fecr family protein | BCL90_2301 | Not Available | Negative | 2641525 - 2642682 | 42849.2 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_2302 | Not Available | Negative | 2642744 - 2643343 | 23096.1 |
| putative membrane protein | BCL90_2303 | Not Available | Negative | 2643526 - 2644068 | 20421.0 |
| protein sco1/2 | BCL90_2304 | Not Available | Negative | 2644142 - 2644837 | 26196.8 |
| caa(3)-type oxidase subunit iv | BCL90_2305 | Not Available | Negative | 2644837 - 2645190 | 13529.1 |
| cytochrome c oxidase subunit 3 | BCL90_2306 | Not Available | Negative | 2645216 - 2645929 | 27097.3 |
| cytochrome c oxidase subunit 3 | BCL90_2307 | Not Available | Negative | 2645961 - 2646539 | 21442.0 |
| protoheme ix farnesyltransferase | BCL90_2308 | Not Available | Negative | 2646543 - 2647451 | 33752.3 |
| cytochrome c oxidase assembly protein subunit 15 | BCL90_2309 | Not Available | Negative | 2647464 - 2648522 | 39522.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
