Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone htpg | BCL90_2279 | Not Available | Positive | 2600396 - 2602282 | 70994.6 |
| hypothetical protein | BCL90_2280 | Not Available | Negative | 2602425 - 2602922 | 19167.2 |
| hypothetical protein | BCL90_2281 | Not Available | Negative | 2602944 - 2603318 | 14912.0 |
| lyttr family two component transcriptional regulator | BCL90_2282 | Not Available | Positive | 2603684 - 2604430 | 28081.9 |
| hypothetical protein | BCL90_2283 | Not Available | Negative | 2604441 - 2604587 | 5485.51 |
| histidine kinase | BCL90_2284 | Not Available | Positive | 2604731 - 2605846 | 43323.2 |
| thiopeptide-type bacteriocin biosynthesis protein | BCL90_2285 | Not Available | Negative | 2605843 - 2608641 | 107016.0 |
| wd40 repeat protein | BCL90_2286 | Not Available | Negative | 2608910 - 2610910 | 75058.6 |
| type ix secretion system porp/sprf family membrane protein | BCL90_2287 | Not Available | Negative | 2610981 - 2611982 | 35951.9 |
| gliding motility-associated-like protein | BCL90_2288 | Not Available | Negative | 2612020 - 2625477 | 454194.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
