Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative metalloprotease with pdz domain | BCL90_2267 | Not Available | Negative | 2587989 - 2589839 | 68299.8 |
| membrane fusion protein (multidrug efflux system) | BCL90_2268 | Not Available | Positive | 2590163 - 2591260 | 38511.8 |
| multidrug efflux pump | BCL90_2269 | Not Available | Positive | 2591263 - 2594373 | 114136.0 |
| outer membrane protein tolc | BCL90_2270 | Not Available | Positive | 2594342 - 2595685 | 49595.2 |
| hypothetical protein | BCL90_2271 | Not Available | Negative | 2595622 - 2595759 | 5074.25 |
| hypothetical protein | BCL90_2272 | Not Available | Positive | 2595868 - 2596674 | 30181.8 |
| hypothetical protein | BCL90_2273 | Not Available | Positive | 2596640 - 2597053 | 15439.9 |
| hypothetical protein | BCL90_2274 | Not Available | Positive | 2597062 - 2597469 | 15708.1 |
| n-acetylglucosamine kinase-like badf-type atpase | BCL90_2275 | Not Available | Positive | 2597624 - 2598487 | 31911.9 |
| response regulator receiver domain-containing protein | BCL90_2276 | Not Available | Positive | 2598597 - 2598989 | 14777.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
