Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_2257 | Not Available | Positive | 2574977 - 2575138 | 6135.83 |
| hypothetical protein | BCL90_2258 | Not Available | Positive | 2575135 - 2576226 | 42659.5 |
| atp-binding cassette subfamily b protein | BCL90_2259 | Not Available | Positive | 2576223 - 2578415 | 83235.0 |
| hlyd family secretion protein | BCL90_2260 | Not Available | Positive | 2578405 - 2579709 | 49684.9 |
| hypothetical protein | BCL90_2261 | Not Available | Negative | 2579799 - 2579924 | 4419.17 |
| oop family ompa-ompf porin | BCL90_2262 | Not Available | Negative | 2580024 - 2581346 | 47470.3 |
| uncharacterized protein duf885 | BCL90_2263 | Not Available | Negative | 2581684 - 2583393 | 65971.6 |
| gamma-glutamyltranspeptidase/glutathione hydrolase | BCL90_2264 | Not Available | Negative | 2583532 - 2585253 | 62079.4 |
| long-chain acyl-coa synthetase | BCL90_2265 | Not Available | Negative | 2585225 - 2587000 | 66369.4 |
| hypothetical protein | BCL90_2266 | Not Available | Positive | 2587255 - 2587728 | 16911.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
