Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa acyltransferase | BCL90_2247 | Not Available | Negative | 2564375 - 2565550 | 41556.3 |
| 3-hydroxyacyl-coa dehydrogenase | BCL90_2248 | Not Available | Negative | 2565702 - 2568107 | 89053.3 |
| dna-binding marr family transcriptional regulator | BCL90_2249 | Not Available | Negative | 2568186 - 2568620 | 16401.8 |
| hypothetical protein | BCL90_2250 | Not Available | Positive | 2568746 - 2569708 | 37245.9 |
| lyttr family two component transcriptional regulator | BCL90_2251 | Not Available | Negative | 2569977 - 2570723 | 29154.6 |
| histidine kinase | BCL90_2252 | Not Available | Negative | 2570731 - 2572644 | 73606.3 |
| hypothetical protein | BCL90_2253 | Not Available | Positive | 2572970 - 2573164 | 6915.06 |
| hypothetical protein | BCL90_2254 | Not Available | Positive | 2573320 - 2573517 | 7013.18 |
| hypothetical protein | BCL90_2255 | Not Available | Positive | 2573596 - 2573802 | 7645.85 |
| atp-grasp peptide maturase of grasp-with-spasm system | BCL90_2256 | Not Available | Positive | 2574043 - 2574975 | 36504.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
