Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication and repair protein reco | BCL90_2225 | Not Available | Negative | 2538137 - 2538862 | 27966.1 |
| hypothetical protein | BCL90_2226 | Not Available | Positive | 2538982 - 2541333 | 87165.4 |
| hypothetical protein | BCL90_2229 | Not Available | Negative | 2542130 - 2542402 | 10026.5 |
| isoleucyl-trna synthetase | BCL90_2230 | Not Available | Positive | 2542672 - 2546073 | 129489.0 |
| trar/dksa family transcriptional regulator | BCL90_2231 | Not Available | Positive | 2546104 - 2546487 | 14411.0 |
| signal peptidase ii | BCL90_2232 | Not Available | Positive | 2546487 - 2547089 | 22843.0 |
| uncharacterized protein duf4269 | BCL90_2233 | Not Available | Positive | 2547682 - 2548200 | 19746.8 |
| uncharacterized protein duf1080 | BCL90_2234 | Not Available | Positive | 2548421 - 2549101 | 25222.5 |
| uncharacterized protein duf2809 | BCL90_2235 | Not Available | Negative | 2549255 - 2549662 | 15993.1 |
| 2-oxoglutarate dehydrogenase e2 component | BCL90_2236 | Not Available | Negative | 2549718 - 2550944 | 43270.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
