Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor protein involved in fe transport | BCL90_2214 | Not Available | Negative | 2527565 - 2530018 | 91521.7 |
| phage shock protein c (pspc) family protein | BCL90_2215 | Not Available | Negative | 2530126 - 2531868 | 66378.5 |
| padr family transcriptional regulator padr | BCL90_2216 | Not Available | Negative | 2531884 - 2532219 | 12371.9 |
| amino acid/polyamine/organocation transporter (apc superfamily) | BCL90_2218 | Not Available | Positive | 2532890 - 2534347 | 51989.9 |
| hypothetical protein | BCL90_2219 | Not Available | Positive | 2534551 - 2534715 | 6117.82 |
| thioredoxin reductase | BCL90_2220 | Not Available | Negative | 2534730 - 2535626 | 32693.1 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | BCL90_2221 | Not Available | Negative | 2535700 - 2536326 | 24159.4 |
| ubia prenyltransferase family protein | BCL90_2222 | Not Available | Negative | 2536425 - 2537336 | 35090.3 |
| Trna-val | Not Available | Not Available | Positive | 2537737 - 2537814 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2537964 - 2538041 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
