Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhomboid-like protein | BCL90_2182 | Not Available | Positive | 2486650 - 2487381 | 27263.7 |
| membrane associated rhomboid family serine protease | BCL90_2183 | Not Available | Positive | 2487374 - 2488228 | 31522.3 |
| endonuclease/exonuclease/phosphatase family metal-dependent hydrolase | BCL90_2184 | Not Available | Positive | 2488228 - 2489340 | 42152.6 |
| nitroreductase | BCL90_2186 | Not Available | Positive | 2490325 - 2490957 | 23166.9 |
| hypothetical protein | BCL90_2187 | Not Available | Positive | 2491243 - 2493969 | 100360.0 |
| lactate dehydrogenase-like 2-hydroxyacid dehydrogenase | BCL90_2188 | Not Available | Negative | 2494083 - 2495042 | 35160.7 |
| uncharacterized protein duf4249 | BCL90_2189 | Not Available | Negative | 2495085 - 2495891 | 30152.7 |
| tonb-dependent receptor-like protein | BCL90_2190 | Not Available | Negative | 2495896 - 2498220 | 86974.3 |
| hypothetical protein | BCL90_2191 | Not Available | Positive | 2498255 - 2498353 | 3548.51 |
| cytochrome c554/c'-like protein | BCL90_2192 | Not Available | Negative | 2498318 - 2499514 | 44522.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
