Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase (quinone) | BCL90_2171 | Not Available | Negative | 2473371 - 2474888 | 56091.5 |
| hypothetical protein | BCL90_2172 | Not Available | Positive | 2475274 - 2476575 | 49886.1 |
| peptide-methionine (s)-s-oxide reductase | BCL90_2173 | Not Available | Negative | 2476702 - 2477301 | 22436.0 |
| isopenicillin n synthase-like dioxygenase | BCL90_2174 | Not Available | Positive | 2477570 - 2478532 | 36151.8 |
| hypothetical protein | BCL90_2175 | Not Available | Positive | 2478578 - 2478817 | 8816.84 |
| hypothetical protein | BCL90_2176 | Not Available | Positive | 2478935 - 2479777 | 31556.6 |
| hypothetical protein | BCL90_2177 | Not Available | Negative | 2479835 - 2480356 | 19021.2 |
| cubico group peptidase (beta-lactamase class c family) | BCL90_2178 | Not Available | Negative | 2480432 - 2482249 | 67256.4 |
| hypothetical protein | BCL90_2179 | Not Available | Negative | 2482236 - 2483870 | 60977.1 |
| dna mismatch repair protein mutl | BCL90_2181 | Not Available | Positive | 2484658 - 2486493 | 68431.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
