Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l17 | BCL90_2107 | Not Available | Negative | 2424481 - 2425005 | 19405.3 |
| dna-directed rna polymerase subunit alpha | BCL90_2108 | Not Available | Negative | 2425100 - 2426092 | 37138.9 |
| small subunit ribosomal protein s4 | BCL90_2109 | Not Available | Negative | 2426178 - 2426786 | 22892.5 |
| ssu ribosomal protein s11p | BCL90_2110 | Not Available | Negative | 2426848 - 2427237 | 13817.0 |
| ssu ribosomal protein s13p | BCL90_2111 | Not Available | Negative | 2427390 - 2427767 | 14180.4 |
| lsu ribosomal protein l36p | BCL90_2112 | Not Available | Negative | 2427836 - 2427952 | 4548.8 |
| translation initiation factor if-1 | BCL90_2113 | Not Available | Negative | 2427954 - 2428172 | 8322.27 |
| methionyl aminopeptidase | BCL90_2114 | Not Available | Negative | 2428244 - 2429029 | 28567.5 |
| protein translocase subunit secy/sec61 alpha | BCL90_2115 | Not Available | Negative | 2429038 - 2430378 | 48165.4 |
| lsu ribosomal protein l15p | BCL90_2116 | Not Available | Negative | 2430386 - 2430877 | 17325.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
