Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aminopeptidase frvx | BCL90_2086 | Not Available | Positive | 2401169 - 2402284 | 41647.8 |
| hypothetical protein | BCL90_2087 | Not Available | Positive | 2402284 - 2402550 | 10241.8 |
| exodeoxyribonuclease-3 | BCL90_2088 | Not Available | Negative | 2403308 - 2404111 | 30532.4 |
| hypothetical protein | BCL90_2089 | Not Available | Positive | 2404233 - 2404691 | 17510.1 |
| hypothetical protein | BCL90_2090 | Not Available | Positive | 2404681 - 2405175 | 19304.3 |
| response regulator receiver domain-containing protein | BCL90_2091 | Not Available | Negative | 2405323 - 2405700 | 14209.4 |
| rna polymerase ecf family sigma subunit | BCL90_2092 | Not Available | Negative | 2405770 - 2406288 | 19925.0 |
| luxr family two component transcriptional regulator | BCL90_2093 | Not Available | Negative | 2406410 - 2407060 | 24254.6 |
| pas domain-containing protein | BCL90_2094 | Not Available | Negative | 2407100 - 2408176 | 40908.6 |
| curved dna-binding protein | BCL90_2095 | Not Available | Positive | 2408940 - 2409836 | 33771.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
