Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family two component transcriptional regulator | BCL90_2075 | Not Available | Positive | 2390741 - 2391466 | 27355.8 |
| delta-1-pyrroline-5-carboxylate dehydrogenase | BCL90_2076 | Not Available | Positive | 2391699 - 2393333 | 60311.8 |
| hypothetical protein | BCL90_2077 | Not Available | Positive | 2393358 - 2393777 | 15789.3 |
| carbonic anhydrase | BCL90_2078 | Not Available | Negative | 2393841 - 2394497 | 24140.8 |
| carbonic anhydrase/sulp family sulfate permease | BCL90_2079 | Not Available | Negative | 2394500 - 2396107 | 57424.6 |
| hypothetical protein | BCL90_2080 | Not Available | Negative | 2396259 - 2396561 | 11466.8 |
| propionyl-coa carboxylase beta chain | BCL90_2082 | Not Available | Positive | 2397222 - 2398763 | 56002.0 |
| putative mfs family arabinose efflux permease | BCL90_2083 | Not Available | Positive | 2398824 - 2400035 | 44236.5 |
| hypothetical protein | BCL90_2084 | Not Available | Positive | 2400050 - 2400652 | 22536.3 |
| acetyltransferase (gnat) family protein | BCL90_2085 | Not Available | Positive | 2400655 - 2401062 | 15970.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
