Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_2044 | Not Available | Negative | 2363858 - 2364463 | 21714.2 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | BCL90_2045 | Not Available | Negative | 2364544 - 2365005 | 16844.8 |
| hypothetical protein | BCL90_2046 | Not Available | Positive | 2365161 - 2366420 | 47786.0 |
| outer membrane protein with beta-barrel domain | BCL90_2047 | Not Available | Positive | 2366705 - 2367412 | 24472.6 |
| putative beta-barrel porin | BCL90_2048 | Not Available | Negative | 2367483 - 2369489 | 76659.3 |
| purine-nucleoside phosphorylase | BCL90_2049 | Not Available | Negative | 2369491 - 2370306 | 30020.7 |
| lipid-a-disaccharide kinase | BCL90_2050 | Not Available | Negative | 2370278 - 2371339 | 40459.3 |
| lathosterol oxidase | BCL90_2051 | Not Available | Positive | 2371822 - 2372961 | 44022.7 |
| flavin-dependent dehydrogenase | BCL90_2052 | Not Available | Positive | 2373353 - 2374483 | 42503.7 |
| methyltransferase family protein | BCL90_2053 | Not Available | Positive | 2374484 - 2375197 | 27020.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
