Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein | BCL90_2032 | Not Available | Negative | 2349889 - 2351289 | 51807.0 |
| peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family) | BCL90_2033 | Not Available | Positive | 2351309 - 2351986 | 25924.2 |
| hypothetical protein | BCL90_2034 | Not Available | Positive | 2352401 - 2352781 | 14716.7 |
| aconitase | BCL90_2035 | Not Available | Positive | 2353115 - 2355880 | 100717.0 |
| aconitase | BCL90_2036 | Not Available | Positive | 2356072 - 2358354 | 81779.0 |
| putative signal transducing protein | BCL90_2039 | Not Available | Negative | 2359112 - 2359543 | 15809.6 |
| beta-glucosidase | BCL90_2040 | Not Available | Negative | 2359598 - 2360935 | 50781.6 |
| muts-like protein | BCL90_2041 | Not Available | Negative | 2361188 - 2363002 | 68473.3 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | BCL90_2042 | Not Available | Positive | 2363114 - 2363587 | 18103.1 |
| hypothetical protein | BCL90_2043 | Not Available | Positive | 2363671 - 2363799 | 5256.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
