Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | BCL90_2008 | Not Available | Negative | 2327459 - 2328298 | 30473.4 |
| putative zn-dependent peptidase | BCL90_2009 | Not Available | Positive | 2328520 - 2331453 | 109757.0 |
| hypothetical protein | BCL90_2010 | Not Available | Positive | 2331581 - 2331763 | 6821.31 |
| putative gh43/duf377 family glycosyl hydrolase | BCL90_2012 | Not Available | Negative | 2331824 - 2332873 | 38919.2 |
| uncharacterized protein yjbj (upf0337 family) | BCL90_2013 | Not Available | Negative | 2332940 - 2333125 | 7027.32 |
| tonb-linked susc/raga family outer membrane protein | BCL90_2014 | Not Available | Positive | 2333324 - 2336410 | 110905.0 |
| susd-like starch-binding protein associating with outer membrane | BCL90_2015 | Not Available | Positive | 2336427 - 2337806 | 49999.9 |
| matrixin | BCL90_2016 | Not Available | Negative | 2337978 - 2339174 | 43548.8 |
| acetyl-coenzyme a synthetase | BCL90_2017 | Not Available | Negative | 2339544 - 2341439 | 70477.2 |
| lsu ribosomal protein l28p | BCL90_2018 | Not Available | Positive | 2341741 - 2341974 | 8816.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
