Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f5/8 type c domain-containing protein | BCL90_1998 | Not Available | Negative | 2311111 - 2311671 | 20444.2 |
| glucokinase | BCL90_1999 | Not Available | Negative | 2312352 - 2313227 | 31692.1 |
| putative alpha-1,2-mannosidase | BCL90_2000 | Not Available | Negative | 2313297 - 2315564 | 85940.5 |
| beta-galactosidase-like protein | BCL90_2001 | Not Available | Negative | 2315669 - 2318113 | 91594.4 |
| laci family transcriptional regulator | BCL90_2002 | Not Available | Negative | 2318312 - 2319316 | 37800.6 |
| putative outer membrane starch-binding protein | BCL90_2003 | Not Available | Negative | 2319515 - 2321167 | 61884.9 |
| tonb-linked susc/raga family outer membrane protein | BCL90_2004 | Not Available | Negative | 2321179 - 2324403 | 117411.0 |
| hypothetical protein | BCL90_2005 | Not Available | Negative | 2324667 - 2325836 | 44635.7 |
| lipid-a-disaccharide synthase | BCL90_2006 | Not Available | Negative | 2325919 - 2327025 | 41409.0 |
| hypothetical protein | BCL90_2007 | Not Available | Negative | 2327174 - 2327446 | 10226.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
