Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-5-phosphate isomerase | BCL90_1988 | Not Available | Negative | 2295186 - 2295875 | 24287.4 |
| hypothetical protein | BCL90_1989 | Not Available | Positive | 2295895 - 2296038 | 5290.3 |
| cytochrome c | BCL90_1990 | Not Available | Negative | 2296852 - 2298813 | 72880.1 |
| uncharacterized protein duf1080 | BCL90_1991 | Not Available | Negative | 2298825 - 2300234 | 50899.5 |
| putative alpha-1,2-mannosidase | BCL90_1992 | Not Available | Negative | 2300376 - 2302664 | 85747.4 |
| basic secretory peptidase family protein | BCL90_1993 | Not Available | Negative | 2302705 - 2303376 | 25217.3 |
| basic secretory peptidase family protein | BCL90_1994 | Not Available | Negative | 2303854 - 2304888 | 39279.7 |
| hypothetical protein | BCL90_1995 | Not Available | Negative | 2304907 - 2305878 | 36781.3 |
| putative outer membrane starch-binding protein | BCL90_1996 | Not Available | Negative | 2305937 - 2307769 | 67716.2 |
| tonb-linked susc/raga family outer membrane protein | BCL90_1997 | Not Available | Negative | 2307780 - 2310983 | 117041.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
