Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine synthase b | BCL90_1976 | Not Available | Positive | 2283588 - 2284319 | 27526.1 |
| uncharacterized membrane-anchored protein yitt (duf2179 family) | BCL90_1977 | Not Available | Positive | 2284316 - 2285176 | 31105.9 |
| riboflavin kinase/fmn adenylyltransferase | BCL90_1979 | Not Available | Positive | 2285324 - 2286310 | 37257.7 |
| transporter (cpa2 family) | BCL90_1980 | Not Available | Positive | 2286999 - 2289212 | 81656.1 |
| putative membrane protein duf2157 | BCL90_1981 | Not Available | Positive | 2289350 - 2290384 | 39674.4 |
| secondary thiamine-phosphate synthase enzyme | BCL90_1982 | Not Available | Positive | 2290531 - 2290953 | 15996.9 |
| membrane protein | BCL90_1983 | Not Available | Negative | 2290955 - 2291923 | 35358.8 |
| hypothetical protein | BCL90_1984 | Not Available | Negative | 2292084 - 2293403 | 47832.7 |
| hypothetical protein | BCL90_1986 | Not Available | Positive | 2294116 - 2294253 | 4833.9 |
| hypothetical protein | BCL90_1987 | Not Available | Negative | 2294347 - 2294736 | 14875.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
