Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_1966 | Not Available | Positive | 2276743 - 2276946 | 7941.32 |
| leucyl-trna synthetase | BCL90_1967 | Not Available | Negative | 2276881 - 2279784 | 111764.0 |
| hypothetical protein | BCL90_1968 | Not Available | Negative | 2279834 - 2279971 | 5240.25 |
| hypothetical protein | BCL90_1969 | Not Available | Positive | 2280014 - 2280184 | 6659.03 |
| hypothetical protein | BCL90_1970 | Not Available | Negative | 2280406 - 2280933 | 19928.3 |
| cell division transport system permease protein | BCL90_1971 | Not Available | Positive | 2281014 - 2281892 | 32746.7 |
| protein of unknown function (duf3098) | BCL90_1972 | Not Available | Positive | 2281892 - 2282119 | 8251.52 |
| uncharacterized protein duf2281 | BCL90_1973 | Not Available | Positive | 2282159 - 2282362 | 7849.47 |
| pin domain nuclease of toxin-antitoxin system | BCL90_1974 | Not Available | Positive | 2282362 - 2282748 | 14887.1 |
| undecaprenyl-diphosphatase | BCL90_1975 | Not Available | Positive | 2282767 - 2283561 | 28960.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
