Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf490 | BCL90_1954 | Not Available | Positive | 2255694 - 2260724 | 184641.0 |
| outer membrane protein assembly factor bama | BCL90_1955 | Not Available | Positive | 2260708 - 2263023 | 87509.7 |
| membrane protein | BCL90_1956 | Not Available | Positive | 2263031 - 2264053 | 37303.4 |
| topoisomerase-4 subunit b | BCL90_1957 | Not Available | Negative | 2264244 - 2266115 | 70914.5 |
| apa family basic amino acid/polyamine antiporter | BCL90_1958 | Not Available | Positive | 2266520 - 2267857 | 48705.0 |
| hypothetical protein | BCL90_1959 | Not Available | Positive | 2267906 - 2267998 | 3659.55 |
| gph family glycoside/pentoside/hexuronide:cation symporter | BCL90_1961 | Not Available | Positive | 2268047 - 2269381 | 49013.2 |
| putative outer membrane starch-binding protein | BCL90_1963 | Not Available | Negative | 2269852 - 2271564 | 62909.6 |
| tonb-linked susc/raga family outer membrane protein | BCL90_1964 | Not Available | Negative | 2271580 - 2274810 | 116986.0 |
| atp-dependent rna helicase rhle | BCL90_1965 | Not Available | Positive | 2275374 - 2276678 | 48077.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
