Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pin domain nuclease of toxin-antitoxin system | BCL90_1943 | Not Available | Positive | 2244567 - 2244956 | 15118.5 |
| 23s rrna (cytosine1962-c5)-methyltransferase | BCL90_1944 | Not Available | Positive | 2244953 - 2245834 | 33391.0 |
| hypothetical protein | BCL90_1945 | Not Available | Positive | 2245925 - 2246974 | 39191.1 |
| peptide-methionine (s)-s-oxide reductase | BCL90_1946 | Not Available | Positive | 2247182 - 2247724 | 20613.3 |
| alkylation response protein aidb-like acyl-coa dehydrogenase | BCL90_1947 | Not Available | Negative | 2247725 - 2248813 | 40479.0 |
| nicotinamide mononucleotide transporter | BCL90_1948 | Not Available | Negative | 2248836 - 2249495 | 25389.9 |
| topoisomerase-4 subunit a | BCL90_1949 | Not Available | Negative | 2249852 - 2252749 | 108462.0 |
| glpgli family protein | BCL90_1951 | Not Available | Negative | 2253198 - 2254883 | 62002.8 |
| hypothetical protein | BCL90_1952 | Not Available | Positive | 2254885 - 2255259 | 14283.7 |
| cytidine deaminase | BCL90_1953 | Not Available | Negative | 2255096 - 2255584 | 17900.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
