Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| miniconductance mechanosensitive channel | BCL90_1933 | Not Available | Negative | 2234175 - 2235449 | 48550.3 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | BCL90_1934 | Not Available | Negative | 2235763 - 2237796 | 75618.3 |
| pimeloyl-acp methyl ester carboxylesterase | BCL90_1935 | Not Available | Negative | 2237819 - 2239168 | 50517.9 |
| putative rdd family membrane protein yckc | BCL90_1936 | Not Available | Negative | 2239446 - 2240066 | 23313.6 |
| hypothetical protein | BCL90_1937 | Not Available | Negative | 2240279 - 2241253 | 36132.8 |
| phage shock protein c (pspc) family protein | BCL90_1938 | Not Available | Negative | 2241259 - 2241966 | 26394.5 |
| hypothetical protein | BCL90_1939 | Not Available | Negative | 2241975 - 2242664 | 25226.2 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | BCL90_1940 | Not Available | Positive | 2242811 - 2243545 | 26152.8 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | BCL90_1941 | Not Available | Positive | 2243545 - 2244297 | 28159.0 |
| uncharacterized protein duf2281 | BCL90_1942 | Not Available | Positive | 2244322 - 2244567 | 9198.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
