Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | BCL90_1921 | Not Available | Negative | 2222841 - 2223866 | 38122.3 |
| hypothetical protein | BCL90_1922 | Not Available | Negative | 2224071 - 2224586 | 19765.1 |
| two-component system alkaline phosphatase synthesis response regulator phop | BCL90_1923 | Not Available | Negative | 2224586 - 2225290 | 27282.1 |
| phospho-acceptor domain-containing protein | BCL90_1924 | Not Available | Negative | 2225299 - 2226165 | 32775.1 |
| glutamate-1-semialdehyde 2,1-aminomutase | BCL90_1925 | Not Available | Negative | 2226280 - 2227650 | 49778.7 |
| porphobilinogen synthase | BCL90_1926 | Not Available | Negative | 2227748 - 2228716 | 36050.3 |
| hydroxymethylbilane synthase | BCL90_1927 | Not Available | Negative | 2228926 - 2230506 | 58971.7 |
| glutamyl-trna reductase | BCL90_1928 | Not Available | Negative | 2230866 - 2232092 | 46517.3 |
| putative membrane protein | BCL90_1929 | Not Available | Positive | 2232228 - 2232614 | 15016.4 |
| alpha/beta hydrolase family protein | BCL90_1931 | Not Available | Positive | 2232885 - 2233712 | 30435.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
