Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | BCL90_1910 | Not Available | Positive | 2215197 - 2215547 | 13057.6 |
| uncharacterized protein duf4230 | BCL90_1911 | Not Available | Negative | 2215725 - 2216285 | 21107.8 |
| hypothetical protein | BCL90_1912 | Not Available | Positive | 2216422 - 2216835 | 15216.0 |
| abc-type fe3+/spermidine/putrescine transport system atpase subunit | BCL90_1913 | Not Available | Negative | 2216849 - 2217841 | 36988.6 |
| outer membrane protein with beta-barrel domain | BCL90_1914 | Not Available | Negative | 2218017 - 2218814 | 30240.8 |
| hypothetical protein | BCL90_1915 | Not Available | Negative | 2218899 - 2219654 | 28115.9 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_1916 | Not Available | Negative | 2219635 - 2220204 | 21667.4 |
| hypothetical protein | BCL90_1918 | Not Available | Negative | 2220682 - 2221839 | 44727.3 |
| putative membrane protein | BCL90_1919 | Not Available | Negative | 2222030 - 2222590 | 21700.7 |
| hypothetical protein | BCL90_1920 | Not Available | Negative | 2222605 - 2222751 | 5562.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
