Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_1900 | Not Available | Positive | 2204428 - 2204826 | 15482.2 |
| dinb family protein | BCL90_1901 | Not Available | Positive | 2204823 - 2205284 | 17350.8 |
| ketol-acid reductoisomerase | BCL90_1902 | Not Available | Positive | 2205481 - 2206962 | 54314.5 |
| 3-isopropylmalate dehydratase large subunit | BCL90_1903 | Not Available | Positive | 2207023 - 2208429 | 50797.7 |
| heme-degrading monooxygenase hmoa | BCL90_1904 | Not Available | Positive | 2208513 - 2208806 | 11261.4 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | BCL90_1905 | Not Available | Positive | 2208885 - 2209472 | 21710.6 |
| molybdate transport system atp-binding protein | BCL90_1906 | Not Available | Positive | 2209585 - 2211048 | 54852.6 |
| 3-isopropylmalate dehydrogenase | BCL90_1907 | Not Available | Positive | 2211154 - 2212281 | 41580.1 |
| 2-isopropylmalate synthase | BCL90_1908 | Not Available | Positive | 2212292 - 2213452 | 42741.1 |
| l-threonine ammonia-lyase | BCL90_1909 | Not Available | Positive | 2213809 - 2215059 | 45914.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
